python setup.py installIn Python the usage is very straightforward:
import nrrdframes, options = nrrd.read(fileName)Saturday, January 31, 2015
Using pynrrd to read nrrd files into Python
Another in the series of posts about file types! This time, a quick note about importing .nrrd image stacks into Python. Download and unzip pynrrd from here. In a terminal, cd into the directory, and run
In Python the usage is very straightforward:
In Python the usage is very straightforward:
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1 comment:
Hi Lana,
In order to read a file named 'filename.nrrd' you need to navigate to the directory the file is in, then enter:
import nrrd
frames, options = nrrd.read('filename.nrrd')
Note that in your case you gave the same variable name, nrrd, to both the module you imported and the file name you are trying to open.
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